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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801066.1_cds_XP_016472676.1_6453
CDS Infomation

[gene=LOC107794675] [db_xref=GeneID:107794675] [protein=branched-chain-amino-acid aminotransferase 2, chloroplastic-like] [protein_id=XP_016472676.1] [location=join(40899..40958,41250..41308,41463..41634,41909..42085,42184..42315,42447..42545,42875..42991,43087..43182,43283..43395,48063..48177)] [gbkey=CDS]
Sequence

ATGATTCGAAGAGCTGCATTTTTTCGCAGATTAATTGACTCTGCTTCTCTACCATCAAAG
ATTGGAGCAAGGTACTATACAGCTCAAGTTGCAACTTCTTTACAATCTACTGGTCAAAGT
GATGAGGAGTCCATTGACATTGATTGGGAGAATCTTGGGTTCCATTTAATGCCAACTGAT
TATATGTACCTAACAAAAAGCAATGAAAATGGTCATTTCGAACAAGGCCAGCTTAATCCC
TATGGAAACATCCACTTGAGCCCCTCTGCTGCTGTCTTAAACTATGGTCAGGGTCTGTTT
GAAGGTACAAAAGCCTATAGAAGAGATGATGGACGATTGTTTCTGTTTCGTCCACATCAA
AATGCGATTAGAATGCAGATTGGTGCTGAAAGAATGTGCATGCCTTGTCCTTCCACTAAT
CAATTTGTAGATGCTGTCAAGCAAACAGCTCTGGCGAACAAGCGTTTTATTCCTCCTCCA
GGTAAAGGGTCTCTTTATATAAGGCCTCTGCTTATAGGAAGTGGACCAATTCTTGGTTTG
GCTCCAGCACCAGACTACACCTTCCTTGTCTATGCTTCTCCTGTAGGAAATTATTTCAAG
GAAGGGACAGCGCCATTGAACTTGTACGTTGAGGAAGACCTTCATCGCGCCTCGCGTGGT
GGATCTGGAGCTGTCAAAAGCATTACTAACTATGCCCCGGTTTTGAGAGCTATAAAGAGT
GCAAAAGAGAAAGGATTCTCAGATGTATTGTACCTTGACTCTTTAAATAAGAGATACATT
GAAGAGGTCTCTTCTTGTAACATTTTCCTTGTGAAGGGAAAAATCCTTTCAACTCCAGCA
GCAAGTGGAACTATTCTTGAAGGAGTGACAAGAAAAAGCATCATGGTCATTGCACGTGAT
CTTGGTTACCAGGTGGAAGAACGTTTGATTGATGTAGATGAATTGACTAATGCTGATGAA
GTATTCTGTACGGGAACTGCAGTTGGTGTTGCTTCCGTTGGTAGCATTACTTACAAAGGC
AAAAGGATTGAGTACAAAGAAAGATCAGAGCAAACAAGTAAGCAACTGTACTCAAGAGTA
ATCGAGATTCAAAGAGGTGTTATCGAGGACAAGAGGGACTGGATTGTCGAGATCGAATAA

Peptide Sequence

PEP ID

XP_016472676.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MIRRAAFFRRLIDSASLPSKIGARYYTAQVATSLQSTGQSDEESIDIDWENLGFHLMPTD
YMYLTKSNENGHFEQGQLNPYGNIHLSPSAAVLNYGQGLFEGTKAYRRDDGRLFLFRPHQ
NAIRMQIGAERMCMPCPSTNQFVDAVKQTALANKRFIPPPGKGSLYIRPLLIGSGPILGL
APAPDYTFLVYASPVGNYFKEGTAPLNLYVEEDLHRASRGGSGAVKSITNYAPVLRAIKS
AKEKGFSDVLYLDSLNKRYIEEVSSCNIFLVKGKILSTPAASGTILEGVTRKSIMVIARD
LGYQVEERLIDVDELTNADEVFCTGTAVGVASVGSITYKGKRIEYKERSEQTSKQLYSRV
IEIQRGVIEDKRDWIVEIE

Transcript Sequence

Gene sequence data has not been registered.